Pixhawk and Mateksys PDB compatibility

I purchased Mateksys micro PDB. I wish to know if it is compatible with Pixhawk. 

To power up the Pixhawk, a 6-pin wire is used to connect the Pixhawk to the power module. In Mateksys PDB there is a 5V supply with only 2 pins, power and ground. So do I just remove the remaining 4 wires from the 6-pin connector and connect both of them? Is that a sensible way to power up the Pixhawk? And if this works, do I need to make any changes in the Mission Planner?

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