Pixhawk arduino integration

Hi guys

I would like to attach an arduino to my pixhawk in order to be able to read external sensors as well as being able to read, i.e., rc inputs and send serial messages to a host computer (I have an onboard intel nuc on my octocopter). 
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This is how I attached the arduino to my pixhawk. My first question here is whether I would still be able to read data sent to the arduino via usb or the uart connection takes over?
I tried the following doing a test on the shell and echo a string to /dev/ttyS1 but I don't seem to be getting any data on the arduino side...
Any help would be much appreciated.
Thanks,
Antonio

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