"avrdude: stk500_getsync(): not in sync: resp=0x00
avrdude: stk500_disable(): protocol error, expect=0x14, resp=0x51"
I am using the newest Arduino (0021) and have chosen the Arduino Mega ATMega 1280 as the board and the right COM port, the green light flashes a few times before the error message pops up. I have also tried a few different PCs (XP, Win7 and Mac OS 10.6) with no luck. From what I found out online this is a common error message if you have chosen the wrong board or there is something wrong with the firmware, hopefully I won't need a new bootloader :)
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do you have a FTDI Cable/Converter to test?